A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

A

a_star() - Method in class org.hypergraphdb.algorithms.GraphClassics

abort() - Method in interface org.hypergraphdb.transaction.HGTransaction

abort() - Method in class org.hypergraphdb.transaction.HGTransactionManager

Abort the current transaction by calling endTransaction(false).

abort() - Method in class org.hypergraphdb.transaction.TransactionBDBImpl

abort() - Method in class org.hypergraphdb.transaction.VanillaTransaction

ABSTRACT - Static variable in class org.hypergraphdb.type.HGPredefinedTypes

AbstractActivity<StateType> - Class in org.hypergraphdb.peer.workflow

AbstractActivity(StateType, StateType) - Constructor for class org.hypergraphdb.peer.workflow.AbstractActivity

AbstractTypeConstructor - Class in org.hypergraphdb.type

This type is a predefined type constructor that manages abstract types in the HyperGraph storage.

AbstractTypeConstructor() - Constructor for class org.hypergraphdb.type.AbstractTypeConstructor

accept(Class<?>) - Method in interface org.hypergraphdb.peer.serializer.SerializerMapper

accept(Class<?>) - Method in class org.hypergraphdb.peer.serializer.SubgraphSerializer

accept(Object) - Method in class org.hypergraphdb.peer.workflow.ProposalConversation

called by client task when accepting

accessed() - Method in class org.hypergraphdb.handle.DefaultManagedLiveHandle

accessed() - Method in interface org.hypergraphdb.handle.HGManagedLiveHandle

accessed() - Method in class org.hypergraphdb.handle.PhantomHandle

accessed() - Method in class org.hypergraphdb.handle.PhantomManagedHandle

AccessibleObjectCache - Class in org.hypergraphdb.util

Utility class to maintain runtime caches of Field, Method and Constructor for use by HGAtomType implementations.

AccessibleObjectCache() - Constructor for class org.hypergraphdb.util.AccessibleObjectCache

ActionQueueThread - Class in org.hypergraphdb.util

This a simple queue that runs as a thread and executes passed in action object (i.e.

ActionQueueThread() - Constructor for class org.hypergraphdb.util.ActionQueueThread

Default constructor.

ActionQueueThread(String) - Constructor for class org.hypergraphdb.util.ActionQueueThread

Constructs an ActionQueue with a specific thread name and a default max size.

ActionQueueThread(String, int, int) - Constructor for class org.hypergraphdb.util.ActionQueueThread

Constructs an ActionQueue with a specific thread name and max size.

Activity - Class in org.hypergraphdb.peer.workflow

An Activity is some task that a peer is currently working one.

Activity(HyperGraphPeer) - Constructor for class org.hypergraphdb.peer.workflow.Activity

Activity(HyperGraphPeer, UUID) - Constructor for class org.hypergraphdb.peer.workflow.Activity

ACTIVITY_TYPE - Static variable in class org.hypergraphdb.peer.HGDBOntology

ActivityFactory - Interface in org.hypergraphdb.peer.workflow

activityFinished(ActivityResult) - Method in interface org.hypergraphdb.peer.workflow.ActivityListener

ActivityListener - Interface in org.hypergraphdb.peer.workflow

ActivityManager - Class in org.hypergraphdb.peer.workflow

The ActivityManager manages all activities currently in effect within a given peer.

ActivityManager(HyperGraphPeer) - Constructor for class org.hypergraphdb.peer.workflow.ActivityManager

ActivityResult - Class in org.hypergraphdb.peer.workflow

A simple bean to hold the outcome of an activity once it has finished execution.

ActivityResult(Activity) - Constructor for class org.hypergraphdb.peer.workflow.ActivityResult

ActivityResult(Activity, Throwable) - Constructor for class org.hypergraphdb.peer.workflow.ActivityResult

ActivityStateListener - Interface in org.hypergraphdb.peer.workflow

ActivityType - Class in org.hypergraphdb.peer.workflow

Store meta information about a particular activity type.

ActivityType(String, ActivityFactory) - Constructor for class org.hypergraphdb.peer.workflow.ActivityType

add(HGHandle) - Method in class org.hypergraphdb.atom.HGAtomSet

add(byte[]) - Method in class org.hypergraphdb.atom.impl.UUIDTrie

Add a new element returning true if it wasn't already in the set and false otherwise.

add(Object) - Method in class org.hypergraphdb.cache.ColdAtoms

add(Object) - Method in class org.hypergraphdb.HyperGraph

Add a new atom to the database using the default, Java Beans based typing mechanism and default system flags.

add(Object, int) - Method in class org.hypergraphdb.HyperGraph

Add a new atom to the database using the default, Java Beans based typing mechanism and the set of specified system flags.

add(Object, HGHandle) - Method in class org.hypergraphdb.HyperGraph

Add a new atom with a specified type and default system flags to the database.

add(Object, HGHandle, int) - Method in class org.hypergraphdb.HyperGraph

Add a new atom with a specified type and system flags to the database.

add(Object) - Method in class org.hypergraphdb.peer.jxta.JXTARemotePeer

add(Object) - Method in class org.hypergraphdb.peer.RemotePeer

Adds the atom on the remote peer.

add(T) - Method in class org.hypergraphdb.storage.DBKeyedSortedSet

add(E) - Method in class org.hypergraphdb.util.ArrayBasedSet

add(E) - Method in class org.hypergraphdb.util.LLRBTree

add(X, Y) - Method in class org.hypergraphdb.util.TwoWayMap

addAction(Runnable) - Method in class org.hypergraphdb.util.ActionQueueThread

addAlias(HGHandle, String) - Method in class org.hypergraphdb.HGTypeSystem

Add a new alias for a given type.

addAll(Collection<? extends HGHandle>) - Method in class org.hypergraphdb.atom.HGAtomSet

addAll(Collection) - Method in class org.hypergraphdb.storage.DBKeyedSortedSet

addAll(Collection<? extends E>) - Method in class org.hypergraphdb.util.ArrayBasedSet

addClass(Class<?>) - Method in class org.hypergraphdb.type.JavaObjectMapper

addClass(String) - Method in class org.hypergraphdb.type.JavaObjectMapper

addEntry(KeyType, ValueType) - Method in interface org.hypergraphdb.HGIndex

Add an entry to the index.

addEntry(LogEntry, Iterator<Object>) - Method in class org.hypergraphdb.peer.log.Log

Adds an event to the log.

addEntry(KeyType, ValueType) - Method in class org.hypergraphdb.storage.DefaultBiIndexImpl

addEntry(KeyType, ValueType) - Method in class org.hypergraphdb.storage.DefaultIndexImpl

addListener(Class<T>, HGListener) - Method in class org.hypergraphdb.event.HGEventManager

addListener(StateListener) - Method in class org.hypergraphdb.peer.workflow.WorkflowState

addListener(StateListener) - Method in class org.hypergraphdb.peer.workflow.WorkflowStateConstant

addListener(MemoryWarningSystem.Listener) - Method in class org.hypergraphdb.util.MemoryWarningSystem

addMapper(Class<?>, Structs.StructsMapper, String) - Static method in class org.hypergraphdb.peer.Structs

Adds a StructsMapper for a specific class.

addOrReplaceSubgraph(Subgraph) - Method in class org.hypergraphdb.peer.StorageService

addOwnPipe(PipeID) - Method in class org.hypergraphdb.peer.jxta.DefaultJXTANetwork

addOwnPipe(PipeID) - Method in interface org.hypergraphdb.peer.jxta.JXTANetwork

addPeerPresenceListener(PeerPresenceListener) - Method in class org.hypergraphdb.peer.jxta.DefaultJXTANetwork

addPeerPresenceListener(PeerPresenceListener) - Method in interface org.hypergraphdb.peer.PeerNetwork

addPredefinedType(HGPersistentHandle, HGAtomType, Class<?>) - Method in class org.hypergraphdb.HGTypeSystem

Specify an application specific predefined type, possibly overriding a default HyperGraph basic type.

addProjection(HGAbstractCompositeType.Projection) - Method in class org.hypergraphdb.type.HGAbstractCompositeType

addSerializerMapper(SerializerMapper, Integer, SerializerMapper) - Static method in class org.hypergraphdb.peer.serializer.DefaultSerializerManager

addSlot(HGHandle) - Method in class org.hypergraphdb.type.RecordType

addSubgraph(Subgraph) - Method in class org.hypergraphdb.peer.StorageService

addToBuffer(HGPersistentHandle, Object) - Method in class org.hypergraphdb.peer.Subgraph

addUnique(HyperGraph, Object, HGQueryCondition) - Static method in class org.hypergraphdb.HGQuery.hg

addUnique(HyperGraph, Object, HGHandle, HGQueryCondition) - Static method in class org.hypergraphdb.HGQuery.hg

addUnique(HyperGraph, Object, Class, HGQueryCondition) - Static method in class org.hypergraphdb.HGQuery.hg

addWellknownSerializer(String, HGSerializer, Integer) - Static method in class org.hypergraphdb.peer.serializer.DefaultSerializerManager

ADVERTISEMENT_TTL - Static variable in class org.hypergraphdb.peer.jxta.JXTAConfig

AffirmIdentity - Class in org.hypergraphdb.peer.workflow

AffirmIdentity(HyperGraphPeer) - Constructor for class org.hypergraphdb.peer.workflow.AffirmIdentity

AffirmIdentity(HyperGraphPeer, UUID) - Constructor for class org.hypergraphdb.peer.workflow.AffirmIdentity

AffirmIdentity(HyperGraphPeer, Object) - Constructor for class org.hypergraphdb.peer.workflow.AffirmIdentity

AffirmIdentityBootstrap - Class in org.hypergraphdb.peer.bootstrap

AffirmIdentityBootstrap() - Constructor for class org.hypergraphdb.peer.bootstrap.AffirmIdentityBootstrap

all() - Static method in class org.hypergraphdb.HGQuery.hg

all - Static variable in class org.hypergraphdb.type.HGPredefinedTypes

and(HGQueryCondition...) - Static method in class org.hypergraphdb.HGQuery.hg

And - Class in org.hypergraphdb.query

Represents the conjunction operator of a query condition.

And() - Constructor for class org.hypergraphdb.query.And

And(HGQueryCondition) - Constructor for class org.hypergraphdb.query.And

And(HGQueryCondition, HGQueryCondition) - Constructor for class org.hypergraphdb.query.And

And(HGQueryCondition, HGQueryCondition, HGQueryCondition) - Constructor for class org.hypergraphdb.query.And

And(HGQueryCondition, HGQueryCondition, HGQueryCondition, HGQueryCondition) - Constructor for class org.hypergraphdb.query.And

And(HGQueryCondition, HGQueryCondition, HGQueryCondition, HGQueryCondition, HGQueryCondition) - Constructor for class org.hypergraphdb.query.And

AndToQuery - Class in org.hypergraphdb.query.cond2qry

AndToQuery() - Constructor for class org.hypergraphdb.query.cond2qry.AndToQuery

AnyAtomCondition - Class in org.hypergraphdb.query

This condition is satisfied by any and all atoms in the HyperGraph database.

AnyAtomCondition() - Constructor for class org.hypergraphdb.query.AnyAtomCondition

anyHandle - Static variable in class org.hypergraphdb.HGHandleFactory

The anyHandle is a persistent handle constant that represents a "don't care" handle during querying and comparison operations.

anyHandle() - Static method in class org.hypergraphdb.HGHandleFactory

anyHandle() - Static method in class org.hypergraphdb.HGQuery.hg

append(List<Object>, List<Object>) - Method in class org.hypergraphdb.peer.Structs

apply(Mapping<?, ?>, HGQueryCondition) - Static method in class org.hypergraphdb.HGQuery.hg

apply(Activity, Object...) - Method in class org.hypergraphdb.peer.workflow.MethodCallTransition

apply(Activity, Object...) - Method in interface org.hypergraphdb.peer.workflow.Transition

ApplyNewIndexer - Class in org.hypergraphdb.maintenance

The MaintenanceOperation will create index entries for a newly added HGIndexer.

ApplyNewIndexer() - Constructor for class org.hypergraphdb.maintenance.ApplyNewIndexer

ApplyNewIndexer(HGHandle) - Constructor for class org.hypergraphdb.maintenance.ApplyNewIndexer

arity(int) - Static method in class org.hypergraphdb.HGQuery.hg

ArityCondition - Class in org.hypergraphdb.query

The ArityCondition is a simply predicate condition that checks the arity (i.e.

ArityCondition() - Constructor for class org.hypergraphdb.query.ArityCondition

ArityCondition(int) - Constructor for class org.hypergraphdb.query.ArityCondition

ARRAY - Static variable in class org.hypergraphdb.type.HGPredefinedTypes

ArrayBasedIterator<T> - Class in org.hypergraphdb.util

Implements an Iterator over the elements of a built-in Java array.

ArrayBasedIterator(T[]) - Constructor for class org.hypergraphdb.util.ArrayBasedIterator

ArrayBasedIterator(T[], int, int) - Constructor for class org.hypergraphdb.util.ArrayBasedIterator

ArrayBasedSet<E> - Class in org.hypergraphdb.util

An implementation SortedSet based on primitive arrays that grow as needed without ever shrinking.

ArrayBasedSet(E[]) - Constructor for class org.hypergraphdb.util.ArrayBasedSet

Initialize from the given array.

ArrayBasedSet(E[], int) - Constructor for class org.hypergraphdb.util.ArrayBasedSet

Initialize an empty set with a given initial capacity.

ArrayBasedSet(E[], int, Comparator<E>) - Constructor for class org.hypergraphdb.util.ArrayBasedSet

Initialize an empty set with a given initial capacity, and a given comparator.

ArrayBasedSet(E[], Comparator<E>) - Constructor for class org.hypergraphdb.util.ArrayBasedSet

Initialize from the given array and with the given Comparator.

ArrayType - Class in org.hypergraphdb.type

An ArrayType handles fixed size arrays of values of the same type (i.e.

ArrayType(Class<?>) - Constructor for class org.hypergraphdb.type.ArrayType

ArrayTypeConstructor - Class in org.hypergraphdb.type

ArrayTypeConstructor() - Constructor for class org.hypergraphdb.type.ArrayTypeConstructor

asByteArray() - Method in class org.hypergraphdb.handle.UUID

Returns the UUID as a 16-byte byte array

assign(WorkflowStateConstant) - Method in class org.hypergraphdb.peer.workflow.WorkflowState

Set a new state value.

assign(WorkflowStateConstant) - Method in class org.hypergraphdb.peer.workflow.WorkflowStateConstant

assign(Object, String, Object) - Method in class org.hypergraphdb.type.JavaTypeFactory

assignPrivate(Class<?>, Object, String, Object) - Method in class org.hypergraphdb.type.JavaTypeFactory

AtActivity - Annotation Type in org.hypergraphdb.peer.workflow

ATOM_INTEREST - Static variable in class org.hypergraphdb.peer.HGDBOntology

ATOM_SET - Static variable in class org.hypergraphdb.type.HGPredefinedTypes

atomAccessed() - Method in class org.hypergraphdb.atom.HGStats

AtomPartCondition - Class in org.hypergraphdb.query

A condition that constraints the value of a component of a composite typed atom.

AtomPartCondition() - Constructor for class org.hypergraphdb.query.AtomPartCondition

AtomPartCondition(String[], Object) - Constructor for class org.hypergraphdb.query.AtomPartCondition

AtomPartCondition(String[], Object, ComparisonOperator) - Constructor for class org.hypergraphdb.query.AtomPartCondition

AtomProjection - Class in org.hypergraphdb.atom

This link represents a relationship between a composite type and one of its projections.

AtomProjection(HGHandle[]) - Constructor for class org.hypergraphdb.atom.AtomProjection

AtomProjection(HGHandle, String, HGHandle, HGAtomRef.Mode) - Constructor for class org.hypergraphdb.atom.AtomProjection

Construct an atom projection link.

AtomProjectionCondition - Class in org.hypergraphdb.query

An AtomProjectionCondition will yield all atoms that are projections along a certain dimension of a given base atom set.

AtomProjectionCondition() - Constructor for class org.hypergraphdb.query.AtomProjectionCondition

AtomProjectionCondition(String, HGQueryCondition) - Constructor for class org.hypergraphdb.query.AtomProjectionCondition

AtomProjectionCondition(String[], HGQueryCondition) - Constructor for class org.hypergraphdb.query.AtomProjectionCondition

AtomQueueType - Class in org.hypergraphdb.atom

AtomQueueType() - Constructor for class org.hypergraphdb.atom.AtomQueueType

atomRead(HGPersistentHandle, Object, byte) - Method in class org.hypergraphdb.cache.DefaultAtomCache

Associate an atom instance and a persistent handle with a live handle.

atomRead(HGPersistentHandle, Object, byte, long, long) - Method in class org.hypergraphdb.cache.DefaultAtomCache

atomRead(HGPersistentHandle, Object, byte) - Method in class org.hypergraphdb.cache.WeakRefAtomCache

atomRead(HGPersistentHandle, Object, byte, long, long) - Method in class org.hypergraphdb.cache.WeakRefAtomCache

atomRead(HGPersistentHandle, Object, byte) - Method in interface org.hypergraphdb.HGAtomCache

Inform the cache that an atom has just been read from persistent storage.

atomRead(HGPersistentHandle, Object, byte, long, long) - Method in interface org.hypergraphdb.HGAtomCache

Inform the cache that an atom with system-level attributes has been loaded.

AtomReference - Annotation Type in org.hypergraphdb.annotation

atomRefresh(HGLiveHandle, Object) - Method in class org.hypergraphdb.cache.DefaultAtomCache

atomRefresh(HGLiveHandle, Object) - Method in class org.hypergraphdb.cache.WeakRefAtomCache

atomRefresh(HGLiveHandle, Object) - Method in interface org.hypergraphdb.HGAtomCache

Refresh a previously evicted atom.

AtomRefType - Class in org.hypergraphdb.type

Represents the type of a HGAtomRef value.

AtomRefType() - Constructor for class org.hypergraphdb.type.AtomRefType

AtomSetType - Class in org.hypergraphdb.atom

Implements the HyperGraph type of HGAtomSet atoms.

AtomSetType() - Constructor for class org.hypergraphdb.atom.AtomSetType

AtomStackType - Class in org.hypergraphdb.atom

AtomStackType() - Constructor for class org.hypergraphdb.atom.AtomStackType

AtomTypeCondition - Class in org.hypergraphdb.query

An AtomTypeCondition examines the type of a given atom and evaluates to true or false depending on whether the type of the atom matches exactly (i.e.

AtomTypeCondition() - Constructor for class org.hypergraphdb.query.AtomTypeCondition

AtomTypeCondition(Class<?>) - Constructor for class org.hypergraphdb.query.AtomTypeCondition

AtomTypeCondition(HGHandle) - Constructor for class org.hypergraphdb.query.AtomTypeCondition

AtomValueCondition - Class in org.hypergraphdb.query

The AtomValueCondition represents a query condition on the atom value.

AtomValueCondition() - Constructor for class org.hypergraphdb.query.AtomValueCondition

AtomValueCondition(Object) - Constructor for class org.hypergraphdb.query.AtomValueCondition

AtomValueCondition(Object, ComparisonOperator) - Constructor for class org.hypergraphdb.query.AtomValueCondition

attachCursor(Cursor) - Method in class org.hypergraphdb.transaction.TransactionBDBImpl